PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0045s0327.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 272aa    MW: 30024.6 Da    PI: 4.5785
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0045s0327.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.78.5e-12202222222
                          --SS-EEEEEEE--TT-SS-E CS
                 WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                          +Dgy+WrKYGqK vk+s+fpr
  Kaladp0045s0327.2.p 202 EDGYRWRKYGQKAVKNSPFPR 222
                          8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-12186222IPR003657WRKY domain
SuperFamilySSF1182901.7E-9193223IPR003657WRKY domain
PROSITE profilePS5081113.161196222IPR003657WRKY domain
SMARTSM007743.2E-5201235IPR003657WRKY domain
PfamPF031061.9E-7202223IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009624Biological Processresponse to nematode
GO:0009733Biological Processresponse to auxin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MMKKEAMESL ISGGSDTSSL CYLDLLGGGA AGYGNLCSMF DGGVVNGAGA DLGFLEMLGV  60
QEFQIPMGYM FDEMAHSGEV MTSSWQAISI DQVPAAGYNN GFVKPMNKRQ QPLFDDRNNN  120
APGTPNSSSI SYASNNEGMV VESEQDDKAD EEEDEEEDGD DAEDQKGSGK SKKQLKAKKG  180
KLKKQRQPRI AFMTKSEVDH LEDGYRWRKY GQKAVKNSPF PRYKPTLTPM LTLPSQLFFK  240
NPDDGFYALQ ELLPLHQCIL WSEEKSGEIM H*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00069PBMTransfer from AT2G47260Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGBra004466.1-P2e-27(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.14e-19WRKY DNA-binding protein 28